Imaging & microscopy
Fluorophore spectra, filter sets, FRET pairs and image analysis.
Recommended
- Fluorescence spectra viewer
Overlay excitation and emission spectra and see which pairs will separate.
Built inNo upload - Filter set and channel checker
Check a multi-colour panel against your filters before you stain anything.
Built inNo upload - FRET pair calculator
Förster radius from real spectra, and the artefacts that will spoil the measurement.
Built inNo upload - Fluorophore brightness comparison
Rank fluorophores by what your setup will actually detect, not by ε × Φ alone.
Built inNo upload - Microscope explorer
Turn a microscope in 3D, follow the light path, and see what each part is for.
Built inNo upload - Fiji / ImageJ
The standard for scientific image analysis, with a plugin for almost everything.
ExternalOpen sourceDesktop install - CellProfiler
High-throughput image analysis pipelines without writing code.
ExternalBroad InstituteFree - napari
Multidimensional image viewer built for Python workflows.
ExternalOpen sourceDesktop install - QuPath
Whole-slide and digital pathology image analysis.
ExternalUniversity of EdinburghDesktop install